Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 230 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (560), Expect = 2e-62
 Identities = 115/224 (51%), Positives = 157/224 (70%), Gaps = 3/224 (1%)

Query: 3   MDFSEIIPALPAL-WEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNY 61
           +DF  I  ++  L ++GM  TL L ++G + G +LGT LA++RLSS  +L +LA  Y+N 
Sbjct: 5   LDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATLYINL 64

Query: 62  FRSIPLLLVITWFYLAVPFVLRWITGEDTP--VGAFTSCVVAFMMFEAAYFCEIVRAGVQ 119
            RS+PL+L+I W Y  VP++ +WI G D P  VG FTS ++ F +FEAAYF EI+R+G+Q
Sbjct: 65  MRSMPLVLLIFWVYFMVPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQ 124

Query: 120 SISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFL 179
           S+S+GQ  AAQALG+ Y Q+M  ++LPQAFR M P+LL Q I+LFQDTSLVY + + DFL
Sbjct: 125 SVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVLLTQVIVLFQDTSLVYVLSITDFL 184

Query: 180 NSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRISV 223
            +A       GR  E  +FA VVYF ISF+AS LVKR+Q R ++
Sbjct: 185 GAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAI 228