Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 263 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  114 bits (285), Expect = 2e-30
 Identities = 70/211 (33%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 12  LPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVI 71
           L  L +G+ +T K+ V+ ++  I +G I  L RLS ++L++ +A  YV   R IPLL+ +
Sbjct: 56  LQFLPDGIAVTFKVTVLSILCSIPIGLITGLGRLSRNRLINLVASTYVEVVRGIPLLVQL 115

Query: 72  TWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQA 131
            + Y A+        G    V    + ++A  +   AY  E+ RAG+ SISKGQ  AA++
Sbjct: 116 FYIYYAL--------GRFLKVPDLLAAIIALSVCYGAYMGEVFRAGIDSISKGQTEAARS 167

Query: 132 LGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGR 191
           LG N A+TM ++ILPQA+R + P +  + I + +DTSLV  + + D L   R        
Sbjct: 168 LGFNRAETMFMVILPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFL 227

Query: 192 SHEFLIFAGVVYFLISFSASWLVKRLQKRIS 222
             E      ++Y LI+   S  V  ++ R++
Sbjct: 228 YFETYTMVALIYLLITLFLSKGVSIMESRLN 258