Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 230 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  127 bits (320), Expect = 1e-34
 Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 18  GMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWFYLA 77
           GM M++ L + G+ G   LG    LMRLS    +   A  YV   R IPLL++I WFY  
Sbjct: 25  GMAMSILLAIGGIFGAFWLGLAFGLMRLSEKWWVRAPAIVYVEVIRGIPLLMLIFWFYFL 84

Query: 78  VPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137
            P  L    G   P     S ++AF++F  AY  EIVRAGV ++  GQM AA+  G++  
Sbjct: 85  APIAL----GHTLPEAE--SALIAFIVFTGAYIAEIVRAGVLALPAGQMEAARGTGLSKT 138

Query: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSA-RSNGDIIGRSHEFL 196
           Q M  +ILPQA R M P  + Q + L +DTSL Y +G+ +   +A + N   +    E  
Sbjct: 139 QAMLFVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSELTRTATQVNNRTLTAPTEIF 198

Query: 197 IFAGVVYFLISFSASWLVKRLQKRIS 222
           +   ++YF+I +  +   +RL+K+++
Sbjct: 199 LTIALMYFVICWVLTATSRRLEKQMA 224