Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  126 bits (317), Expect = 4e-34
 Identities = 77/209 (36%), Positives = 123/209 (58%), Gaps = 4/209 (1%)

Query: 15  LWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWF 74
           L EG+ +TL++ ++ +I GIVLG +  L R+S +  L  LA  Y+   R  PLL+ +  +
Sbjct: 127 LLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLW 186

Query: 75  YLAVPFVLRWITGEDTPVGAFTSC---VVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQA 131
           Y  V  +L  +  E   + A       V+A  +F  AY  EIVRAG+QS+ +GQM AA++
Sbjct: 187 YFVVGTLLNALF-EKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARS 245

Query: 132 LGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGR 191
           LGM+YAQ+MR +ILPQAFR++ P L  Q I L +D+SL+  + + +   + R       +
Sbjct: 246 LGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQ 305

Query: 192 SHEFLIFAGVVYFLISFSASWLVKRLQKR 220
             E  I   ++Y +++F+ S  V+ L++R
Sbjct: 306 PFELWIVCALLYLVLTFTLSLCVQYLERR 334