Pairwise Alignments

Query, 256 a.a., glutamate / aspartate ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (663), Expect = 3e-74
 Identities = 137/243 (56%), Positives = 176/243 (72%), Gaps = 2/243 (0%)

Query: 13  MISIKNVNKWYGDFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 72
           MI+I N++K YGD  VL   +  +++GEVV V GPSGSGKST ++C+N LE   +GDI +
Sbjct: 1   MINITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIEI 60

Query: 73  DGTSIADPKTNLPKLRSRVGMVFQHFELFPHLTITENLTIAQRKVLGRSEAEATKKGLAL 132
           +G SI      + KLR +VGMVFQ+F LFPH T+ +N+T+A   +   ++AEA  K LAL
Sbjct: 61  EGQSITAKDACVDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEADNKALAL 120

Query: 133 LDRVGLSAHAKKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDPEMVSEVLDVMV 192
           L +VGL   A  +P  LSGGQ+QRVAIARALAM+P +MLFDEPTSALDPEMV +VLDVM 
Sbjct: 121 LTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDVLDVMK 180

Query: 193 QLAQEGMTMMCVTHEMGFARKVANRVIFMDKGSIIEDCTKEEFFGDQSARDQRTQHLLSK 252
            LAQ+GMTM+ VTHEMGFAR V++RVIFMD G ++E    EE F     ++ RTQ  LSK
Sbjct: 181 DLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELF--TRPKEARTQSFLSK 238

Query: 253 ILQ 255
           +L+
Sbjct: 239 VLR 241