Pairwise Alignments

Query, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  378 bits (970), Expect = e-109
 Identities = 218/442 (49%), Positives = 274/442 (61%), Gaps = 15/442 (3%)

Query: 8   VLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLEL 67
           + ++EDD  V     Q L L             AL  I       VVSD+RLP  DGL L
Sbjct: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65

Query: 68  LNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALEQRGLS 127
           L  LK     +PV+LITGHGD+DMAV A+  GA+DF+EKPF PERL + V +A+ Q   +
Sbjct: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125

Query: 128 REVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELVARC 187
               +    LA    LE  +IG+  +++ LRE IA VA    NV+I GETG GKELVA+C
Sbjct: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185

Query: 188 LHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDE 247
           LH  S RQ   FVA+NCG +PENLFESE+FGHEA AFTGA KRRIGK+E A+ GTLFLDE
Sbjct: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245

Query: 248 VESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQFRSDLYYR 307
           +ESMP+ +Q+K+LRVLQ+  +ER+GSNQ I +D RVIAA K   + L Q  +FR DL+YR
Sbjct: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAK---EELRQHAEFRQDLFYR 302

Query: 308 LNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGNVREL 367
           LNV  L LPPLRER +DIL LFEHF  Q    +     +L       L+ + WPGNVREL
Sbjct: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQVKPTW----RSLSEADRLALLTYRWPGNVREL 358

Query: 368 RNVAERYALG--------LPAFKKGPSGGANQGLLFAEAVEAFERNLLTDALQRTGGNLS 419
           RNVA RYAL         L +        A+ GL  A  V  FER ++  AL R  GN+S
Sbjct: 359 RNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNIS 418

Query: 420 QASQELGMAKTTLFDKVKKYGL 441
           +  +EL + + TL  K++K+GL
Sbjct: 419 EVMKELDLPRRTLNQKMQKFGL 440