Pairwise Alignments

Query, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  312 bits (800), Expect = 1e-89
 Identities = 186/467 (39%), Positives = 269/467 (57%), Gaps = 44/467 (9%)

Query: 8   VLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLEL 67
           V +V+DD  +    ++ L+   I CE    AE  L  +  +   ++VSDIR+PG+DG+ L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 68  LNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRAL----EQ 123
           LN++  R   LPV+++T H D+D AV A + GA++++ KPF  +  + +V RA+    EQ
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQ 125

Query: 124 RGLSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKEL 183
           R  S       R     S+ E  IIG +PAM+ +   I  ++ +S +VLI GE+GTGKEL
Sbjct: 126 RKTSH------RPSENYSAPE--IIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKEL 177

Query: 184 VARCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTL 243
           VA  LH  S R   PF+ALN   +P++L ESE+FGHE  AFTGA   R G+ E ANGGTL
Sbjct: 178 VAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTL 237

Query: 244 FLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQFRSD 303
           FLDE+  MP+++Q +LLRVL +    R+G + +I VD R++AAT  +L+ L   G+FR D
Sbjct: 238 FLDEIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFRED 297

Query: 304 LYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGN 363
           L++RLNV+ + +P LRERR+DI +L +HFL  +A     E  TL+ +T+  L   DWPGN
Sbjct: 298 LFHRLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGN 357

Query: 364 VRELRNV----------AERYALGLP----------------AFKKGPSGGANQGL---- 393
           VR+L N+          +E     LP                +++K     A   L    
Sbjct: 358 VRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALASGE 417

Query: 394 --LFAEAVEAFERNLLTDALQRTGGNLSQASQELGMAKTTLFDKVKK 438
             L A A+  FER LL  AL  T G+  +A++ LG  + TL  K+K+
Sbjct: 418 TELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKE 464