Pairwise Alignments

Query, 1434 a.a., putative ATP-dependent DNA helicase lhr from Pseudomonas putida KT2440

Subject, 724 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens FW300-N2E3

 Score =  136 bits (343), Expect = 7e-36
 Identities = 127/416 (30%), Positives = 194/416 (46%), Gaps = 50/416 (12%)

Query: 26  FATVTDAQAQAWP-LIHAGQSMLLAAPTGSGKTLSAFLAVLDELLREGMKHQGELPAQTL 84
           + ++ DAQ  A P L+ A Q +++AA T +GKT +AFL +L  LL     +  + P    
Sbjct: 6   WTSLRDAQEWAVPVLVDADQDVIIAAATAAGKTEAAFLPILTHLL-----NHNDPPGS-- 58

Query: 85  VIYVSPLKALSNDIRLNLQAPLEGISQAIAEQGLNAPRITTAVRTGDTPQKERAAMRKLA 144
           V+Y+SPLKAL ND    L    E +             I      GD    ++    K +
Sbjct: 59  VLYISPLKALINDQWGRLSRLCEQLE------------IPVVGWHGDISSSKKHRFLKSS 106

Query: 145 PHILVTTPESLYVL-MGSASGREGL-AHVHTVIVDEIHALAGNKRGAHLALTLERLQALC 202
             +L+ TPESL  L +   S   G+  ++  ++VDE+HA  G++RG  L   + R++ + 
Sbjct: 107 EGVLLITPESLEALFVNRGSSLAGVFQNLRYIVVDELHAFIGSERGKQLQSLMHRVELVA 166

Query: 203 KKPLRRIGLSATQRPVERVAQFLVGSGRPCAIVDIGHARKRDLAIEV-----PPVP---L 254
            + L R+GLSAT   +   A+FL  +G     V       + L +++     PP+     
Sbjct: 167 GRRLPRVGLSATLGDMRLAAEFLRPAGVDTVTVIESKNSNQTLQVQIRGYIQPPMSELRK 226

Query: 255 GAVMAIDVWG-------------LVYDRLATLAREHRTTLVFVNTRRLAERITRHLSDRL 301
             + + D  G              + D L  + R     L+F N+R   E     L  R 
Sbjct: 227 TPIQSPDEDGDEDETENKASPDFAIADHLYKVLR-GSNNLIFPNSRPQVEWYADQLRRRC 285

Query: 302 GKEAVA----AHHGSLSKALRLDAEQRLKSG-QLQVLVATASLELGIDIGDIDLVCQVAS 356
            K+ +      HHGSLSK LR  AE  LK+G Q    + T +LELGIDIG I  V Q+  
Sbjct: 286 EKDGLPNEFWPHHGSLSKDLREQAEHALKAGNQAASAICTTTLELGIDIGSIKTVVQIGP 345

Query: 357 PGSIAAFLQRVGRAGHQVDGVPKGRLFPTSRDDLIECVALLDCVRQGELDALHIPR 412
           P S+A+  QR+GR+G +       R +      L +  +L D +RQG +  + + R
Sbjct: 346 PPSVASLRQRLGRSGRRPGENAVLRAY-CKESPLKDGSSLSDQLRQGLVQTIAMVR 400