Pairwise Alignments

Query, 1434 a.a., putative ATP-dependent DNA helicase lhr from Pseudomonas putida KT2440

Subject, 885 a.a., ATP-dependent helicase Lhr and Lhr-like helicase from Paraburkholderia bryophila 376MFSha3.1

 Score =  217 bits (552), Expect = 5e-60
 Identities = 181/599 (30%), Positives = 266/599 (44%), Gaps = 46/599 (7%)

Query: 14  FHPAVSTWFRRHFATVTDAQAQAWPLIHAGQSMLLAAPTGSGKTLSAFLAVLDELLREGM 73
           F   +  WF        D Q + W  +  G S LL A TG+GKT + +   L  L     
Sbjct: 63  FADKLHAWFEARGWQPFDFQREVWREMERGASGLLHATTGAGKTWAVWFGALAALASSAS 122

Query: 74  KHQGEL--------PAQTLVIYVSPLKALSNDIRLNLQAPLEGISQAIAEQGLNAPRITT 125
                         P    V++++P++AL+ D    LQ+    +          A   T 
Sbjct: 123 SAPTATRKRAAVTQPEPLTVLWITPMRALAADTARALQSSATEL----------AVPWTV 172

Query: 126 AVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGREGLAHVHTVIVDEIHALAGN 185
            +RTGDT   ERA   +  P  L+TTPESL +++  A  RE L+H+  VIVDE H L GN
Sbjct: 173 GLRTGDTSSAERARQNRRMPSALITTPESLSLILTRADAREVLSHLKFVIVDEWHELLGN 232

Query: 186 KRGAHLALTLERLQALCKKPLRRIGLSATQRPVERVAQFLVGSGRPCAIVDIGHARKRDL 245
           KRG    L L RL A  +  L+  GLSAT   +   A+ L+   R   +   G   K  +
Sbjct: 233 KRGTQTQLALARL-AHWRPELQVWGLSATLGNLPFAAEVLLAPVRTPRVSVHGKLPKALI 291

Query: 246 AIEVPP-----VPLGAVMAIDVWGLVYDRLATLAREHRTTLVFVNTRRLAERITRHLSDR 300
              V P      P G  M +     V D +     E  T+LVF NTR   E   + L + 
Sbjct: 292 VDTVIPETIERFPWGGHMGMRQVEAVADAIG----EAHTSLVFTNTRSQCEVWYQALLEA 347

Query: 301 LGK--EAVAAHHGSLSKALRLDAEQRLKSGQLQVLVATASLELGIDIGDIDLVCQVASPG 358
             +   A+A HHGSL + +R   E+ LKSG L+V+V T+SL+LG+D   ++ V Q+ SP 
Sbjct: 348 RPEWAGAIALHHGSLDQEVREWVERGLKSGLLKVVVCTSSLDLGVDFLPVERVFQIGSPK 407

Query: 359 SIAAFLQRVGRAGHQVDGVPKGRLFPTSRDDLIECVALLDCVRQGELDALHIPRAPLDVL 418
            +A  +QR GR+GH      +  + PT   +L+E  A  + V + +++    P  P DVL
Sbjct: 408 GVARLMQRAGRSGHAPGRPSRVTIVPTHALELVEAAAAREAVEKRQIEGRETPEKPFDVL 467

Query: 419 AQQIVAEASNQAWHEQELLDCLRQATPYAELDQHHYQALLRMLAEGYNGRQGV------- 471
            Q +V  A    +  +EL D +R A  Y  L  + +   L  +  G    +         
Sbjct: 468 VQHLVTVAIGGGFDARELYDEIRTAYAYRHLTPNEFDWALGFVEGGGTALRAYPDYHRVV 527

Query: 472 -RSAYLHRDAVSGTLRGRRGSQLTALTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVES 530
             S  L+R      +R R  + +  + + GT+  N  Y          IG++ E F    
Sbjct: 528 RESDGLYRVPREDLVR-RHRNNVGTIVANGTL--NVAYLA-----GGRIGAIEESFVSRL 579

Query: 531 IAGDIFQLGNASYRILRVEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAVARLQAR 589
             GDIF  G  +  ++RV+     V+ A      +P W G     S EL+ A   + AR
Sbjct: 580 KPGDIFTFGGRALELIRVQDMTAWVKRATSGRGAMPQWAGSRMPLSSELAEATLTMLAR 638