Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

 Score =  191 bits (485), Expect = 3e-53
 Identities = 122/395 (30%), Positives = 204/395 (51%), Gaps = 1/395 (0%)

Query: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHDAGSRQPRRQRLSRA 60
           +  YR++ ++  GK     + A SE   R  L++Q +  ++L++           R+   
Sbjct: 9   LKNYRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSK 68

Query: 61  QLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQG 120
            +  LTRQLAT+   G+P+V AL  +    R+  + S+L  +  S+  G  L++++    
Sbjct: 69  DITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTAS 128

Query: 121 APFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMGVSLAVVI 180
           A F  LY  LVE GE SG+L +V  RLA + E+ ++ + K   ALIYP++++ V+L V  
Sbjct: 129 AHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSY 188

Query: 181 GLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPW-LLGVALLLGGLAGWLLRK 239
            ++T V+P+    F   G  LP  T  ++ LS  +     W  + +A  + GL       
Sbjct: 189 LMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNS 248

Query: 240 PHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIR 299
               L+  +L L+ P IGN+L     A+ +R+LA    +G+ +L +L+   +T GN    
Sbjct: 249 FQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFE 308

Query: 300 LAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFAR 359
            A+ +V +    G  ++ A+  ++ FP +++ MV  GE SG L DML +VA   E     
Sbjct: 309 TAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDN 368

Query: 360 QVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQL 394
            VD    + EPL+I+ +G VV  +V+A+ LPI  L
Sbjct: 369 TVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403