Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 407 a.a., general secretion pathway protein F (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  275 bits (703), Expect = 2e-78
 Identities = 160/402 (39%), Positives = 247/402 (61%), Gaps = 7/402 (1%)

Query: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQL---QRHDAGSRQPR---- 53
           MP + Y+A+D  GK  K  ++AD+ RHAR  LR+Q L    +      +A ++       
Sbjct: 1   MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRLMPLDILPVTEKEAKAKSSGFALF 60

Query: 54  RQRLSRAQLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLA 113
           ++ +S A+L  +TRQ+ATL  AG+P+ ++L  + +Q  +  L S+++A+R  + EG  LA
Sbjct: 61  KRGISVAELALITRQIATLVAAGLPIEESLKAVGQQCEKDRLASMIMAVRSRVVEGYSLA 120

Query: 114 RSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMG 173
            SLA     F  LY A+V +GE+SGHL  VL RLAD+ E+ Q+ + K + A+IYP +L  
Sbjct: 121 DSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTERRQQLKSKLQQAMIYPIMLTL 180

Query: 174 VSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGLA 233
           V++ VV  L+  VVPK+  QF H G  LP  T  LI  S  + + G  ++ V  +L  + 
Sbjct: 181 VAIGVVSVLLAAVVPKVVGQFEHMGAELPATTRFLIAASDFVQNYGLLVVLVLGILLVVF 240

Query: 234 GWLLRKPHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETI 293
             LL+ P + ++    LL++P IG + + L +AR AR+L+IL  S V LL+ +++A+E +
Sbjct: 241 QRLLKSPIFKMKFHTFLLKMPVIGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVL 300

Query: 294 GNRRIRLAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVADDQ 353
            N R+R A++     V+ GTSL  AL  ++ FP +++ M+ SGE SG L DMLER AD+Q
Sbjct: 301 QNMRVRAAVDDATARVREGTSLSTALTNTKLFPAMMLYMIASGEKSGQLEDMLERAADNQ 360

Query: 354 ERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLN 395
           +R F   V  A+ +FEP++++ M  VVLFIV+A+L PI+ LN
Sbjct: 361 DREFESNVTLALGVFEPMLVVSMAGVVLFIVMAILQPILALN 402