Pairwise Alignments

Query, 485 a.a., membrane-bound lytic murein transglycosylase F from Pseudomonas putida KT2440

Subject, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 39/263 (14%)

Query: 20  LFLL----LGACVEKPSTLERVKEDGVLRV-ITRNSPATYFQDRNGETGFEYELVQHFAD 74
           LFLL    +  C+   +T++R    G L V +    P T +++     GF+++L+   A 
Sbjct: 12  LFLLSISIISGCISSQNTMKR----GTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEIAK 67

Query: 75  DLGVKLQIETADNLDELYDALGKPSGPVLAAAGLVSSERRK----TQVRYSHPYLEVTPQ 130
            + +    +  ++  EL+DAL K     + +   V+ ERRK    T+V Y        P+
Sbjct: 68  RMNLNTDFKIYNSKSELFDALEKNEVDCIGSR-TVNYERRKFVDFTRVYYYDSVRVAVPE 126

Query: 131 VIYRNGRPRPTGAKGLVGKKIMVLKGSSHADQLAELKKQY------PALQYEESDAVEVV 184
                     T  K L GK + V++GS      +EL + Y        L Y+  +     
Sbjct: 127 ------SSSVTLLKELKGKNLGVIEGSVS----SELVESYLTNIGCKCLYYDTPE----- 171

Query: 185 DLLRMVDEGQIDLTLVDSNELAMNQVYFP-NVRVAFDLGETRDQRWAVAAGEDN-SLLNE 242
           +L   V+ G++D  +   +E+ +  +    NV+  +   +     WA+   ++N +L N 
Sbjct: 172 NLTNAVENGEVDAVI--GHEMYLEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNS 229

Query: 243 INEYLDKAQKNGTLQRLKDRYYG 265
           IN+ L + + +GTL  LK ++YG
Sbjct: 230 INDILLEMENDGTLDELKLKWYG 252