Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 507 a.a., carbohydrate porin from Burkholderia phytofirmans PsJN

 Score =  110 bits (275), Expect = 1e-28
 Identities = 117/454 (25%), Positives = 178/454 (39%), Gaps = 50/454 (11%)

Query: 25  QAAEAFSSESKW----MTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHGGYNDDKTARYS 80
           QA +A      W    M GD GG R  L   G  FTL    EV  NL GG    K A Y 
Sbjct: 73  QATQANQWTGFWNRQQMLGDIGGLRPWLGKYGVTFTLTETSEVLANLRGGLA--KGADYD 130

Query: 81  DQFALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSSVQEVWGRGQTW 140
                   LD QK  G     F ++  +  G NLS +++            +      T 
Sbjct: 131 GLTTATVQLDTQKAFGLPGGLFNVSALQIHGANLSANKLGTLNTASGIEADD------TT 184

Query: 141 RLTQMWIKQKYFDGALDVKFGRFGEGEDF--NSFPCDFQNLAFCGSQVGNW---VGGIWY 195
           RL ++W +Q + +  +DVK G+    ++F  + +   F N  F    + ++    GG  Y
Sbjct: 185 RLWELWYQQSFLNKRIDVKIGQQSIDQEFITSQYSALFVNTMFGWPALPSYDMPSGGPAY 244

Query: 196 NWPVSQWALRVKYNITPEFFVQVGAFEQNP----------SNLETGNGFKLSGSGTKGAI 245
             P+S   +RV+  ITP      G ++ +P          +N    NG    G       
Sbjct: 245 --PLSDLGVRVRGQITPSLTALAGVYDGDPLGNNPNNKSGTNFNLHNGTLFIGELQYAIN 302

Query: 246 LPVEA-VWSPKVNGLPGEYRLGYYYSTAK-ADDVYDDVN---GNPQALTGEAFKSHSSKH 300
            P +  +      GLPG Y+LG +Y+    AD  YD+      NP A +G A ++H   +
Sbjct: 303 QPADGEMVGAGGGGLPGTYKLGVWYNNGSFADQRYDNTGLSLANP-ATSGVA-QNHRGDY 360

Query: 301 GWWVVAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIG 360
             + VA Q +     D  R + +FA         N+V     VG+V K  F  R  D +G
Sbjct: 361 SIYAVADQMIWRPDPDEPRSIGVFARVMGAPGDRNLVSLAANVGVVMKAPFQGRDNDSVG 420

Query: 361 FGVARIHVNDDVKKRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPN 420
             +  I V + V          +    + N G   ++ +E   E  Y + V  W  V+ +
Sbjct: 421 LALTYIKVGNHVN------GLDADTRAFTN-GPYGVRTSETALEATYQYQVNPWWQVQAD 473

Query: 421 LQYIKSPGG-------VDEVDNALVAGLKIQSSF 447
            QY  + G           + N  V G++   +F
Sbjct: 474 AQYTFNAGAGQNPNDPTQPLRNTFVIGVRTNINF 507