Pairwise Alignments

Query, 484 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 453 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  164 bits (416), Expect = 4e-45
 Identities = 145/486 (29%), Positives = 226/486 (46%), Gaps = 54/486 (11%)

Query: 8   RRWRLLPRSLLGRMLLLTLLVVLLAQGLSSIIWVSQLRASQLQGLRASASSLAHSMSASV 67
           RR RLLP +L GR +LL    +L A  +  ++   Q +    Q L          ++A +
Sbjct: 4   RRARLLPDTLAGRFVLLLATAILAANLIGLVVLGLQQQRFDRQTLD---DRWIARIAALI 60

Query: 68  SYFRSLPVAYRPLVLDQLRSMGGTRFFVSLNATPLDMQALPVTPRKQAVIDVFQQVLHER 127
               ++    R ++  Q+ S    RF V    TPL                V +     R
Sbjct: 61  PVLETVDADTRQVLTQQV-SNRLARFRVG--QTPL----------------VARTGRDSR 101

Query: 128 LGSQMEISVEFVGPDDLRIF-----NSGLKLDELPRSWAHYSLTLE-PLKPPVLVTQIRL 181
             S      E +G  DLR+       S    +  P + A   + +  PL P       R 
Sbjct: 102 SASLAAGLAETLGRTDLRVALIDRPASRPAPERTPGARAGRIIAVSVPLSP-------RE 154

Query: 182 GEGEWLYIAS----LLPEPYTGLEAERLPRQQIGFIVLTTALLLLFIGLLVHWQSWPLKR 237
           GE  WL + +      P P          R  + F+ L+   +L    +     + PL R
Sbjct: 155 GEAAWLNVTTGGGPPRPSPVDS-------RPFLTFLALSLLSVLAVGIVFARRLARPLGR 207

Query: 238 LARAAREMSLGADVAPVAEAGGSEVVEVSRAFNSMRERISRYLTERSQLFSAISHDLRTP 297
           L+ AA+    G   A V E G  E+   +RAFN+M+  ISR+  ER ++ +AI HDLRTP
Sbjct: 208 LSDAAQAAGRGDRDARVPEEGPREMRAAARAFNAMQTEISRFDAERMRMIAAIGHDLRTP 267

Query: 298 ITRLRLRVELLEDERLQAKFSQDLDELELLVKGALQCVKDTDIHENIEPVDLNQVLEILA 357
           +T LR+R E+++D + +    + LDE+ ++  G +   +     E ++ VDL  +L  L 
Sbjct: 268 MTSLRIRAEMVDDAKQREAMVRTLDEMTVMADGLVSYARHGQDSEAMQAVDLGGLLSKLC 327

Query: 358 EPYLGDGRITVEGQALAPYPGKPLALRRCIGNLIDNAIKYGERARLRIIDGAEGFVLQVD 417
                +     +G +     G+P+ L R IGNLIDNA++YGE AR+ +       ++ VD
Sbjct: 328 ----AERGAEYDGISEVQVMGRPIGLGRAIGNLIDNALRYGEAARVTLARQDGHAIVTVD 383

Query: 418 DQGPGVPQQQLEQVFEPHFR----LAGQQQGYGLGLGIARNIAHSHGGEVSLLNLREGGL 473
           D GPG+  ++++++F+P  R     + +  G GLGL IAR I  +HGG ++L N  EGGL
Sbjct: 384 DTGPGIAPERMDEMFQPFRRGDHSRSAETGGVGLGLSIARTIVLAHGGILTLENRTEGGL 443

Query: 474 RVTLYL 479
           R T+ L
Sbjct: 444 RATVRL 449