Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 249 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (410), Expect = 6e-45
 Identities = 95/232 (40%), Positives = 129/232 (55%), Gaps = 4/232 (1%)

Query: 4   AGKSILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDED 63
           A   IL+V+DD   RE L  YL + G++V    DG   R        DL++LD+ LP  D
Sbjct: 2   ANHHILVVEDDPVGRETLAAYLRKEGYKVSDVEDGDSMRKVFSQQTVDLILLDIRLPGVD 61

Query: 64  GFSLCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALL 123
           G  L R +R    Q+ V +IM+T   DE DR++ LE+GADDY+ KPF+ REL AR K LL
Sbjct: 62  GLQLLREIRH---QSEVGVIMVTGKDDEVDRIVALEMGADDYVTKPFNVRELLARAKNLL 118

Query: 124 RRTEFGQTAPGNA-VLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILD 182
           RRT   + A  +    +F  W LD     LF  DG +V L+  +F LL  F   P +++ 
Sbjct: 119 RRTLSAREASEDENQKSFAGWTLDIPRRCLFAPDGSDVRLTRGEFELLCCFASRPGRVMT 178

Query: 183 RDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLA 234
           RD + +    R+  P DR VD+ V RLR+++    K PR I TV G GY+ A
Sbjct: 179 RDNLLDYVSHRDWAPSDRTVDVLVGRLRRKIEADPKAPRHIITVHGIGYVFA 230