Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 239 a.a., two-component system response regulator OmpR from Rahnella sp. WP5

 Score =  184 bits (466), Expect = 2e-51
 Identities = 98/228 (42%), Positives = 147/228 (64%), Gaps = 6/228 (2%)

Query: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67
           IL+VDDD  +R LL+ YL+  GFQV + A+ +     L      L++LD+MLP EDG S+
Sbjct: 7   ILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSI 66

Query: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127
           CR +R       +PIIM+TA  +E DR++GLE+GADDY+ KPF+PREL ARI+A+LRR  
Sbjct: 67  CRRLRSQSNP--MPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQA 124

Query: 128 F---GQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRD 184
               G  +   AV++F  ++L+  +  +F R+ E + L+  +FA+LK  + HP++ L RD
Sbjct: 125 NELPGAPSQEEAVISFGKFKLNLGTREMF-REDEPMPLTSGEFAVLKALVSHPREPLSRD 183

Query: 185 TIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYL 232
            + N  RGRE   ++R +D+ +SRLR+ + +    PR I+TV G GY+
Sbjct: 184 KLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYV 231