Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 275 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  212 bits (539), Expect = 7e-60
 Identities = 114/237 (48%), Positives = 151/237 (63%), Gaps = 10/237 (4%)

Query: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67
           IL+VDDD EIR LL  YL + GF+  + ADG      LE    DLV+LDVMLP +DG +L
Sbjct: 7   ILVVDDDPEIRALLTGYLDKHGFRAESAADGSEMFRMLEVGRYDLVVLDVMLPGDDGLTL 66

Query: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127
           CR +R    ++ +P+IMLTA  D+ DR+IGLELGADDY+ KPF+PREL ARI+ +LRR  
Sbjct: 67  CRKLRA---RSELPVIMLTALDDDTDRIIGLELGADDYVAKPFNPRELVARIRTVLRRAR 123

Query: 128 F-------GQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQI 180
                    +    +  + F  W LDTV   L   DG  V LSGA++ LL+ FL +P ++
Sbjct: 124 ALPENIAKAEPEAMSRTIRFAGWTLDTVPRHLVAPDGVVVNLSGAEYRLLRFFLKYPNRV 183

Query: 181 LDRDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237
           + RD + + T+GR     DR +D+ VSRLR RLRD  + P++I+TVRG GY LA  V
Sbjct: 184 MSRDQLLDLTQGRAAEAFDRSIDVLVSRLRTRLRDNGREPQIIKTVRGDGYYLATDV 240