Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 171 a.a., sigma-70 family RNA polymerase sigma factor from Rhodopseudomonas palustris CGA009

 Score = 58.2 bits (139), Expect = 7e-14
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 8/148 (5%)

Query: 17  LLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPF--VFQTARNLALDHLRARR 74
           L R L   +G+   A + L ET+L +    G  P E   PF  + +TA N+A+   R  +
Sbjct: 9   LCRRLAVRLGSKEAARETLHETWLHLRS--GNDPGEVQRPFGYLLRTALNVAISRERTEQ 66

Query: 75  VQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHG 134
            + + L  +V D +   +A PA   E  A A + ++ L   L +L+ R++ I + SR+ G
Sbjct: 67  RRNKRL--EVVDML--ELADPAPGPEREAEARRQVEFLEQVLRELTPRRRAILLASRIEG 122

Query: 135 ATYLEIAEQLSVSPSTVQKELKLIMAIC 162
                IAE L +S   V+ ELK  +  C
Sbjct: 123 VPLRRIAEHLGLSQRFVEMELKAALEYC 150