Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 168 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 9/171 (5%)

Query: 2   SQSRFNSVFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQT 61
           S S  + ++L     ++  L    G    A+D  Q+ + ++ +A     +++   +VF+ 
Sbjct: 4   SDSLLSRIYLENYREIVDFLSLRTGCRHAAQDCAQDCWFKLCKARPAEAVDNGRSYVFRV 63

Query: 62  ARNLALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQL---LKHLSVSLNQ 118
           A N+A+D  R+   + R+  D            P  +S D     Q    L+ L   +  
Sbjct: 64  AANIAVDWHRSNGRELRLQADYAAS------GDPTATSPDTLETVQQRRNLERLEAIIRA 117

Query: 119 LSERQQRIFILSRLHGATYLEIAEQLSVSPSTVQKELKLIMAICMGVAERL 169
           L  R   +F+L+RL G TY E A++L +S S V+K +  ++  C+ + E +
Sbjct: 118 LPPRTVEVFVLNRLEGLTYTETAKRLGISASAVEKHIARVLLQCLPILEEM 168