Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)

Query: 9   VFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNLALD 68
           ++L     L   L + V     A +L QET+LR+  + G+  I +   F+++ A NLA+D
Sbjct: 10  LYLQHVAELRHYLAQRVACREVARELAQETFLRMMLSDGKDAIRNPRAFLYRIAANLAVD 69

Query: 69  HLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFI 128
           H RA   + R +   +P E     A P    E  A A Q L  L+ ++ QL  R + +F+
Sbjct: 70  HYRAEAGRPREI---LPLEDCAEQACPRPGPEQVASARQTLARLAAAVEQLPPRCREVFL 126

Query: 129 LSRLHGATYLEIAEQLSVSPSTVQKEL 155
             +  G    ++A +  +S + ++K L
Sbjct: 127 RHKFDGCRQADLAREYGISVNAIEKHL 153