Pairwise Alignments

Query, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 315 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (313), Expect = 2e-33
 Identities = 103/317 (32%), Positives = 152/317 (47%), Gaps = 17/317 (5%)

Query: 41  SPARPDA--RARAMDEALDWLVRLQC--ADAADTQAFEAWLSAAPENAEAYVEAEALWNG 96
           S A PDA  +AR   EA DWL+ L    A  AD +A   W   +PE+A+A+ +A+ALW G
Sbjct: 7   SIASPDATPQARLAGEARDWLILLTSGRATVADARALRLWCGQSPEHAQAFEQAKALWQG 66

Query: 97  TPLHKVATHMHQQQRRSWRGRLRSHWKPLATAALLLVGLFTVGNLPMRLQADHLTVVGER 156
             L   A  +  Q  R +  R        A+AA LL+     G +   L AD++T VGE+
Sbjct: 67  --LQPAAAAL--QAPRHFGRRALLGGAIAASAAFLLIRATVPGGVS-GLGADYVTDVGEQ 121

Query: 157 QRLQLEDGAKVLLNTNSAFASER-QDGRQVARLLQGEAYFQVPEGAQLPLEVEAGPLRAQ 215
           +R++L +G  + LNT +  +     DG Q   LL GE   Q    AQ+ + V+AG     
Sbjct: 122 RRVELAEGVSLELNTQTRLSHRALADGGQGLELLSGEIEVQ-GRSAQV-VSVQAGAGWIS 179

Query: 216 VRDTDFAVRYLDGEAQVRVQRG--DVDLQGERDQRIRLSAGDSISVGPQGFGQRQRPDMH 273
                F +RY D         G   V++QG   +R RL  G  ++  P   G  +R D+ 
Sbjct: 180 AAQARFNIRYTDQSVCATCLEGVVQVEVQG---RRFRLEPGMQMTYEPHQVGAPKRADVS 236

Query: 274 KDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRAL 333
             +AW +  LVF +  L+ V+ E+ RY PG ++  N +L    V   +RLDQ       +
Sbjct: 237 AAIAWREQVLVFNDATLASVIDEINRYRPGMLLLLNRELGQRKVQARFRLDQLAGVALLI 296

Query: 334 AHITSAQLHEYPALVIL 350
                A+  E P  V++
Sbjct: 297 RDAYGAKCTELPGGVVV 313