Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 448 a.a., Type IV fimbriae expression regulatory protein PilR from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (585), Expect = 1e-64
 Identities = 130/312 (41%), Positives = 195/312 (62%), Gaps = 6/312 (1%)

Query: 192 ALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALNCA 251
           +LLG+SP + +++ +  ++A   AP+ + GE+G GKELVAR  H    R   PF+ +NC 
Sbjct: 137 SLLGDSPPMLSVRKQIEKLARSQAPVYISGESGCGKELVARLIHEQGPRANLPFVPVNCG 196

Query: 252 ALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRFLS 311
           A+P  L ESE FG+  G+F+GA    KPGL + A+ GT+FLDE+ ++   +Q KLLR + 
Sbjct: 197 AIPTELMESEFFGHRKGSFSGAIED-KPGLFQAAHGGTLFLDEVADLPLAMQVKLLRAIQ 255

Query: 312 DGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRGQD 371
           + + R VGG +E  VDVRI+ ATH+DL+  VA G FR+DL+YRLNV+ L VPPLR+R +D
Sbjct: 256 EKAVRAVGGQQEEVVDVRILCATHKDLDGEVAAGRFRQDLYYRLNVIELRVPPLRERRED 315

Query: 372 ILMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGNLVD 431
           I +LA+  +Q+       P  +L P    AL +  +PGNVR+L+N++ RA  +CE   ++
Sbjct: 316 IELLANHMLQRLAANTGSPPVKLHPQALDALRSYRFPGNVRELENMLERAYTLCEQQQIE 375

Query: 432 IGDLDIA---GTSVARGQD-GEVASLEQAVGDFEREL-LQRLYASYPSTRQLAGRLQTSH 486
             DL +A   G++     D  +V +LE  + D ER+L LQ L  +  +    A RL+ S 
Sbjct: 376 ADDLRLAEGNGSAEPGNPDLMQVDNLEDYLEDVERKLILQALEETRWNRTAAAQRLKLSF 435

Query: 487 TAIAQRLRKYGI 498
            ++  RL+K G+
Sbjct: 436 RSMRYRLKKLGL 447