Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 519 a.a., Phenylalanine hydroxylase transcriptional activator PhhR from Pseudomonas fluorescens FW300-N1B4

 Score =  385 bits (989), Expect = e-111
 Identities = 218/514 (42%), Positives = 305/514 (59%), Gaps = 16/514 (3%)

Query: 1   MRIHVSFIDRVGITQEVLALLGARNLNLDAVEMVPPN---VYIDAPTLSPAVLEELHDAL 57
           MRI V   +R+GI +++L LL    +N+   E+   +   +Y+  P L     + L    
Sbjct: 1   MRIKVHCQNRIGILRDILNLLVEYGINVARGEVGGEHGNAIYLHCPNLINIQFQALRPKF 60

Query: 58  FEVHGVQSVDVVDILPGQRRHLQLDALLAAMSDPVLAVDSAGLVLLANPALIELCG---R 114
             + GV  V  V ++P +RRH++L+ALL A+  PVL++D  G ++ AN A  +L G    
Sbjct: 61  EAIGGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDMGGSIVAANRAAAQLLGVRVD 120

Query: 115 ESAGRSVGELFGDPALLQALLDNNFHLPMREMQLNGHSLLLDAMPITN--------AGGL 166
           E  G  +     D  L + +  N   +    +++ G   L D  P+ +        AG +
Sbjct: 121 EVPGIPLSRYAEDFDLPELVRANKSRINGLRVKVKGDVFLADIAPLQSEHDESEAMAGAV 180

Query: 167 LTLYPPSRMGERLSALHHDHAEGFDALLGESPAIRTLKARALRVAALDAPLLVHGETGTG 226
           LTL+   R+GER+  +      GFD++   S  +  +   A R+A LDAPLL+ GETGTG
Sbjct: 181 LTLHRADRVGERIYNVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTG 240

Query: 227 KELVARACHAVSSRHAAPFLALNCAALPESLAESELFGYAPGAFTGAQRGGKPGLMELAN 286
           KEL+ARACH  S R  +P +ALNCA LPES+AE+ELFGY PGAF GA+  GK GL+EL  
Sbjct: 241 KELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTA 300

Query: 287 QGTVFLDEIGEMSPYLQAKLLRFLSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGS 346
            GT+FLD +GEMSP LQ KLLRFL DG FRRVG D EV +DVR+I AT  DL  + A G 
Sbjct: 301 GGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGE 360

Query: 347 FREDLFYRLNVLNLEVPPLRDRGQDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANP 406
           FR+DL++RLNVL+L +PPLR+    +  L   F+ QA  QI  P  +L P+    L    
Sbjct: 361 FRQDLYHRLNVLSLHIPPLRECLDGLAPLVEHFLDQASRQIGCPLPKLAPAAMERLSHYH 420

Query: 407 WPGNVRQLQNVIFRAAAICEGNLVDIGDLDIAGTSVAR--GQDGEVASLEQAVGDFEREL 464
           WPGNVRQL+NV+F+A ++C+G  V    + +    V +  G       L++ VG FE+ +
Sbjct: 421 WPGNVRQLENVLFQAVSLCDGGTVKAEHIRLPDYGVRQPLGDFSLEGGLDEIVGRFEKAV 480

Query: 465 LQRLYASYPSTRQLAGRLQTSHTAIAQRLRKYGI 498
           L+RLY+ +PS+RQL  RL  SHT IA +LR+Y +
Sbjct: 481 LERLYSEHPSSRQLGKRLGVSHTTIANKLREYEV 514