Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 519 a.a., Transcriptional regulator of aromatic amino acids metabolism from Pseudomonas stutzeri RCH2

 Score =  384 bits (987), Expect = e-111
 Identities = 221/517 (42%), Positives = 310/517 (59%), Gaps = 22/517 (4%)

Query: 1   MRIHVSFIDRVGITQEVLALLGARNLNLDAVEMVPPN---VYIDAPTLSPAVLEELHDAL 57
           MRI +   +RVGI +++L LL    +N+   E+       +Y+  P L    L+ L   +
Sbjct: 1   MRIKILCQNRVGILRDMLNLLVDYGINVARGEVGGEQGNAIYLHCPNLMNLQLQALRPKI 60

Query: 58  FEVHGVQSVDVVDILPGQRRHLQLDALLAAMSDPVLAVDSAGLVLLANPALIELCG---R 114
             + GV  +  V ++P +R  L+L+ALL A+  PVL++D +G ++ AN A  +L G    
Sbjct: 61  EALPGVFELRKVSLMPSERHSLELNALLGALEFPVLSIDMSGAIVAANRAAAQLLGVRVD 120

Query: 115 ESAGRSVGELFGDPALLQALLDNNFHLPMREMQLNGHSLLLDAMPITN--------AGGL 166
           E  G S+     D  L + +  N   +    +++ G   L D  P+ +        AG +
Sbjct: 121 EVPGMSLSRYAEDFDLPELVRANKARINGLRVKIKGDVFLADIAPLQSEHDDSEALAGAV 180

Query: 167 LTLYPPSRMGERLSALHHDHAEGFDALLGESPAIRTLKARALRVAALDAPLLVHGETGTG 226
           LTL+   R+GER+  +      GFD++   S  +  +   A R+A LDAPLL+ GETGTG
Sbjct: 181 LTLHRADRVGERIYQVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTG 240

Query: 227 KELVARACHAVSSRHAAPFLALNCAALPESLAESELFGYAPGAFTGAQRGGKPGLMELAN 286
           KEL+ARACH  S R  +PF+ALNCA LPES+AE+ELFGY PGAF GA+  GK GL+EL  
Sbjct: 241 KELLARACHLSSPRGQSPFMALNCAGLPESMAETELFGYGPGAFEGARPEGKLGLLELTA 300

Query: 287 QGTVFLDEIGEMSPYLQAKLLRFLSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGS 346
            GT+FLD +GEMSP LQAKLLRFL DG FRRVG D EV +DVR+I AT  DL  + A G 
Sbjct: 301 GGTLFLDGVGEMSPRLQAKLLRFLQDGGFRRVGSDEEVYLDVRVICATQLDLSELCANGQ 360

Query: 347 FREDLFYRLNVLNLEVPPLRDRGQDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANP 406
           FR+DL++RLNVL+L +PPLRD    +  LA  F+ QA  QI  P   L+P     L    
Sbjct: 361 FRQDLYHRLNVLSLHIPPLRDCLDGLQPLALHFIDQASRQIGCPLPTLSPQALERLAGYH 420

Query: 407 WPGNVRQLQNVIFRAAAICEGNLVDIGDLDIAGTSVAR-----GQDGEVASLEQAVGDFE 461
           WPGNVRQL+N +F+A ++CEG  +    + + G   A+       +G++AS+   VG FE
Sbjct: 421 WPGNVRQLENTLFQAVSLCEGGTIKPEHIRLPGYGAAQPLGDFSLEGDLASI---VGRFE 477

Query: 462 RELLQRLYASYPSTRQLAGRLQTSHTAIAQRLRKYGI 498
           + +L+ L+  +PS+RQL  RL  SHT IA +LR++G+
Sbjct: 478 KAVLEGLHKQFPSSRQLGKRLGVSHTTIANKLREHGL 514