Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 462 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  230 bits (586), Expect = 9e-65
 Identities = 126/246 (51%), Positives = 161/246 (65%), Gaps = 1/246 (0%)

Query: 190 FDALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALN 249
           F  +LG S  +R L  +  ++A  + P+LV GE+GTGKELVARA HA S R   PFLA+N
Sbjct: 143 FHGMLGRSRVMRGLFDQIRQLARAEGPVLVIGESGTGKELVARAVHAESERANRPFLAIN 202

Query: 250 CAALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRF 309
           CA LP  L ESE FG+  GAFTGA R  K GL + A+ GT+FLDEIGEM   LQAKLLR 
Sbjct: 203 CAGLPAELLESEFFGHVAGAFTGANRAHK-GLFQQADGGTLFLDEIGEMPLPLQAKLLRV 261

Query: 310 LSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRG 369
           L +G+ R VG +RE+ VDVRII+A++R LE      +FREDLF+RL    L+VPPLRDR 
Sbjct: 262 LQEGTIRPVGAERELTVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPLRDRE 321

Query: 370 QDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGNL 429
           +D+ +LA  F+     +  RP   L P+  + L   P+PGNVR+LQN I RA   C G  
Sbjct: 322 EDLELLAAGFVAHFAARSGRPVRGLAPAVLAQLRRYPFPGNVRELQNAIERAVTFCHGRS 381

Query: 430 VDIGDL 435
           +++  L
Sbjct: 382 IELEHL 387