Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  247 bits (631), Expect = 5e-70
 Identities = 145/312 (46%), Positives = 193/312 (61%), Gaps = 8/312 (2%)

Query: 193 LLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALNCAA 252
           L+G SPA++ L  RA  VAA DA + + G +GTGKEL+ARA H  S R   PF+A+NCAA
Sbjct: 137 LVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLARAIHLASPRADKPFVAINCAA 196

Query: 253 LPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRFLSD 312
           +PE+L ESELFG+  GAFTGA    K GL   A+ GTVFLDEIG+M   LQAKLLR L +
Sbjct: 197 IPENLLESELFGHRKGAFTGATYNHK-GLFLEADGGTVFLDEIGDMPLSLQAKLLRVLQE 255

Query: 313 GSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRGQDI 372
              R VG  + V VDVR++SATHRDL+ ++  G FREDL+YRLNV++L +P L +R +DI
Sbjct: 256 RQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLYYRLNVVSLALPLLAERREDI 315

Query: 373 LMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAI--CEGNLV 430
            +LA+ F+Q+  ++  +P     P    AL+  PWPGNVRQLQNV+ +A A+    G LV
Sbjct: 316 PLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVRQLQNVVEQAVALSPVSGGLV 375

Query: 431 DIGDLDIAGTSVARGQDGEVASLEQAVGDFERELLQRLY-ASYPSTRQLAGRLQTSHTAI 489
               +        R  D    SL++A   FER+ L RL   +  S  Q A   Q + T  
Sbjct: 376 PAALIQ----GALRSGDSAFTSLDEAKKVFERDYLVRLLRLTEGSVTQAARLAQRNRTEF 431

Query: 490 AQRLRKYGIPGK 501
            + L ++ +  K
Sbjct: 432 YKLLERHQLDAK 443