Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 594 a.a., Fis family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  242 bits (618), Expect = 2e-68
 Identities = 137/346 (39%), Positives = 201/346 (58%), Gaps = 30/346 (8%)

Query: 179 LSALHHDHA--------EG--FDALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKE 228
           L A H  H+        EG   +A++GE   +R LK    RVA   + +++ GE+GTGKE
Sbjct: 248 LMAFHQSHSTADFSSGQEGPQIEAMVGECRPMRQLKKLISRVAPSPSSVMIAGESGTGKE 307

Query: 229 LVARACHAVSSRHAAPFLALNCAALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQG 288
           +VARA H +S RHA PF+A+NCAA+PE L ESELFGY  GAFTGA   GK GL++ AN G
Sbjct: 308 VVARAIHKLSDRHAKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANSG 367

Query: 289 TVFLDEIGEMSPYLQAKLLRFLSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFR 348
           T+FLDEIG+M   LQAKLLR +     + VG    V+VD+RIISAT+++LE  +AEG FR
Sbjct: 368 TLFLDEIGDMPLTLQAKLLRAIESREIQPVGASHPVQVDIRIISATNQNLELYIAEGKFR 427

Query: 349 EDLFYRLNVLNLEVPPLRDRGQDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWP 408
           EDL+YRLNV+ L +PPLR+R +DI +L H+F+     ++      +       L    WP
Sbjct: 428 EDLYYRLNVIPLRLPPLRERQEDIELLIHYFLHLHTGRLNLVYPGVAQDVIDFLKRYRWP 487

Query: 409 GNVRQLQNVI-FRAAAICEGNLVDIGDL---------------DIAGTSVARGQDGEVAS 452
           GN+R+L N++ +    +  G ++D+  L                 A  +    Q+  V +
Sbjct: 488 GNIRELSNLMEYLVNVVPSGEIIDMSLLPPNLLSSSELASQPPSSASAAATLAQEENVTA 547

Query: 453 LEQAVGDFERELLQRLYASYPSTRQLAGRLQTSHTAIAQRLRKYGI 498
           LE    + ER++++   + Y + +Q A  L      + ++++KY +
Sbjct: 548 LE----EMERQMIRDALSRYSNKKQAADELGIGIATLYRKIKKYSL 589