Pairwise Alignments

Query, 401 a.a., glutamate:sodium symporter from Pseudomonas putida KT2440

Subject, 407 a.a., sodium/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  345 bits (886), Expect = 1e-99
 Identities = 188/396 (47%), Positives = 265/396 (66%), Gaps = 13/396 (3%)

Query: 9   TLVAASLVLLLGRGLVARIGFLRAYNIPEPVAGGLVVALSLLALRSFDVHVQFDTSLQTP 68
           + + A  VL +G  +   +   + YNIPEP+ GGLVVA  +  L   D+ + F   +Q  
Sbjct: 12  SFLIAIFVLFIGHSINRHVRVFKQYNIPEPIVGGLVVAAVIAFLHFQDITLAFSLPMQNT 71

Query: 69  LMLAFFATIGLSADFASLKKGGRVVAVFLLVVTGLLMVQNAMGIGLATALGLDPLMGLLA 128
           LML FF+TIGLSA++  L  GG+ V +FL V +  +++QNA+G+ LA+ LGLDP++GL+A
Sbjct: 72  LMLMFFSTIGLSANYKLLLSGGKKVFIFLGVASVYIIIQNAVGVSLASLLGLDPILGLIA 131

Query: 129 GSISLSGGHGTGAAWGATFTERFGLASASELAMASATFGLVLGGLIGGPVARLLIKR--- 185
           GSI+LSGGHGTG AW  TF E +G+ +  E AMA+ATFGLV+GG+IGGPVA+ LI +   
Sbjct: 132 GSITLSGGHGTGVAWSQTFAENYGI-NTLEFAMAAATFGLVMGGIIGGPVAQRLISKHNL 190

Query: 186 VETPGVQEEA----PQLPKGFEQPDKERLITSFSFIETLALIAVSLLTGTLLNGLLKGTA 241
           V + GV  +     PQL   ++Q ++++ +T+ + IETL ++   +        L+    
Sbjct: 191 VSSYGVGRKHHATHPQLVT-YDQLEEDQ-VTAKTIIETLFVLLFCVAGAKWFTVLVSEYG 248

Query: 242 F---ELPTFVCVLFVGVVLRNGLRALGVYKVFEREVSVLGNVSLSLFLAIALMSLKLWDL 298
               ++P FV  LF+GVV+ N       YK     + V+G V+LSLFL++ALM+LKLW++
Sbjct: 249 LNWLKMPDFVYALFLGVVIANITEVTRGYKPHTESIDVIGTVALSLFLSMALMNLKLWEI 308

Query: 299 AALALPFFTLLAAQTLVMALFAIFVTFKVMGRNYDAAVLAAGHCGFGLGATPTAIANMQA 358
             LA+P   +L  QT V+A+FA FVTFKVMG NYDAAV+  GHCGFG+GATPTA+ NM A
Sbjct: 309 LDLAIPLLIILVVQTAVLAVFAYFVTFKVMGSNYDAAVITGGHCGFGMGATPTAVMNMGA 368

Query: 359 VTQRYGASHLAFLVVPMVGAFFIDIINVIVIKLYLA 394
           +  R G S  AF+VVP+VGAFFIDI+N+IV++ YL+
Sbjct: 369 LVSRTGPSPQAFMVVPIVGAFFIDIVNLIVLQGYLS 404