Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 27  VRAFLRSRLSRRPAEIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVS 86
           +RAF  S + R     +D+VQD ++     +  ++    + AW+  I R +L   +R   
Sbjct: 19  LRAFAMSLIGRHD-RADDLVQDTIMKAWAKQDHFEIGTNMKAWLFTILRNELYSQMRKRG 77

Query: 87  RRDARHDVLDDDAQLFAV----SEVESAEASRDLTKLLKQLPERQRLPIVHVKLEGLSVE 142
           R     +V D D  L        E   +   +D  + L+QLP  QR  I+ V   G S E
Sbjct: 78  R-----EVQDSDGHLTETLAHHPEQYGSLDLQDFRRALEQLPPDQREAIILVGASGFSYE 132

Query: 143 ETAQLTGLSSSAVKVGIHRGLKALSRLI 170
           E A + G +   +K  ++R  + L  ++
Sbjct: 133 EAATICGCALGTIKSRVNRARQRLQEIL 160