Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 193 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 39  PAEIEDMVQDVLLAVHNARHTYQP-QQPLTAWVQAIARYKLADHLR---SVSRRDARHDV 94
           P E ED+ QDV L +   R  +QP       W+  +   +  DH R   ++   DA    
Sbjct: 55  PTEAEDIAQDVFLKLWTNRDQWQPGAGSFRTWLYRVVTNRCIDHTRKRTAIPIDDAPE-- 112

Query: 95  LDDDAQLFAVSEVESAEASRDLTKLLKQLPERQRLPIVHVKLEGLSVEETAQLTGLSSSA 154
           + DDA+   +    ++E +  + + L+ L E QR+ I     E L+  E A +  LS +A
Sbjct: 113 IPDDAR-GPLENCHASETADRVRQALRFLSEPQRMAITLYYNEDLTAAEVATVMDLSLNA 171

Query: 155 VKVGIHRGLKALSRLI 170
           V+  + RG   L  L+
Sbjct: 172 VESLLKRGRHKLRELL 187