Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 190 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  206 bits (523), Expect = 3e-58
 Identities = 103/173 (59%), Positives = 130/173 (75%)

Query: 1   MKALLLQGLTGDQLAYQDFLGTLALHVRAFLRSRLSRRPAEIEDMVQDVLLAVHNARHTY 60
           +K L ++GL+G+  AYQ FLG L+ ++RAFLR RL R P E+ED+VQ+ LLAVHN RHTY
Sbjct: 17  LKDLFVRGLSGNNAAYQTFLGELSSYLRAFLRKRLIRLPDEVEDLVQEALLAVHNQRHTY 76

Query: 61  QPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQLFAVSEVESAEASRDLTKLL 120
            P QPL+AWVQAIARYKL D  R  +  + R+D LDD   LF+ ++ E+AEA RDL KLL
Sbjct: 77  DPSQPLSAWVQAIARYKLVDLFRRRAIYEQRNDTLDDGMDLFSSADAEAAEARRDLNKLL 136

Query: 121 KQLPERQRLPIVHVKLEGLSVEETAQLTGLSSSAVKVGIHRGLKALSRLIGGA 173
             LP+  RLPI+H KLEGLSV E A ++G+S SA+KVG+HRGLKAL+  I GA
Sbjct: 137 ADLPDHFRLPIMHTKLEGLSVREAADVSGMSESAIKVGVHRGLKALAAKIRGA 189