Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 201 a.a., RNA polymerase EcfG family sigma factor sigT from Caulobacter crescentus NA1000

 Score = 65.5 bits (158), Expect = 6e-16
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 20  LGTLALHVRAFLRSRLSRRPAEIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLA 79
           L TL  H+RAF R+ L+  P   +D+ QD ++   +AR ++Q    + AW   I R    
Sbjct: 23  LVTLIPHLRAFART-LTGDPTAADDLAQDAMMKAWDARASFQLGTNMKAWTFMILR---- 77

Query: 80  DHLRSVSRRDARHDVLDDDA---QLFAVSEVESAEASRDLTKLLKQLPERQRLPIVHVKL 136
           +   S  RR  R   LD +A    L AV + E+  A  +L + L  LP  QR  ++ V  
Sbjct: 78  NQFYSEKRRSWRQSQLDQEAAERTLVAVDDPEAPVALDELRQGLSMLPAEQREALILVGA 137

Query: 137 EGLSVEETAQLTGLSSSAVKVGIHRGLKALSRLI 170
            G + EE A++   +   VK  + R  +AL  ++
Sbjct: 138 GGFAYEEAAEICNCAVGTVKSRVSRARRALQAIL 171