Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 190 a.a., RNA polymerase sigma factor from Burkholderia phytofirmans PsJN

 Score =  221 bits (564), Expect = 4e-63
 Identities = 112/174 (64%), Positives = 137/174 (78%)

Query: 1   MKALLLQGLTGDQLAYQDFLGTLALHVRAFLRSRLSRRPAEIEDMVQDVLLAVHNARHTY 60
           +KAL ++GL G+  AYQ FL  L  H+R FLR RL     ++ED+VQ++LLAVHN RHTY
Sbjct: 17  LKALFVRGLDGNAAAYQAFLSDLTGHLRGFLRKRLFYLQDDVEDLVQEILLAVHNGRHTY 76

Query: 61  QPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQLFAVSEVESAEASRDLTKLL 120
           +P QPLTAWV AIARYKLAD  R+ SRR+A H  LDD+ ++FA  +VE AEA RDL+KLL
Sbjct: 77  RPDQPLTAWVHAIARYKLADFFRARSRREALHMPLDDELEIFATCDVEPAEARRDLSKLL 136

Query: 121 KQLPERQRLPIVHVKLEGLSVEETAQLTGLSSSAVKVGIHRGLKALSRLIGGAN 174
           +QLP+RQRLPI+HVKLEGLSV ETA+LTGLS SAVKVG+HRGLKAL+    G +
Sbjct: 137 EQLPDRQRLPILHVKLEGLSVTETAKLTGLSESAVKVGVHRGLKALALKFQGTS 190