Pairwise Alignments

Query, 371 a.a., Permease YjgP/YjgQ family protein from Pseudomonas putida KT2440

Subject, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 6e-66
 Identities = 130/361 (36%), Positives = 209/361 (57%), Gaps = 6/361 (1%)

Query: 1   MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFL 60
           MI+ RYL RE + +  A+  VL ++ +S +FI+ LA A+ G +   ++  I+G  +P   
Sbjct: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60

Query: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120
            L+LPL L++GILL +GRLY ESE+TV++ATG+  + L+   +  A + A + A+ +L L
Sbjct: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120

Query: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 180
           AP    +   ++ Q  A    D L  G FQ   DGS V + + + + +  L  VF+++  
Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRK--LYNVFVAQLA 178

Query: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240
                     PSV+ +  G  +  +DG + + L +G RY+G P + DY    +D+Y  L+
Sbjct: 179 ----PRDSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLI 234

Query: 241 PKPEVAEEVTEREALPTSELIGKEGLRERAELQWRLSLPILVFVVTLLAVPLSRVNPRQG 300
            + EV     + EALPT  L+     R +AELQWR+SL + + ++T+L VPLS VNPRQG
Sbjct: 235 GQREVKSAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQG 294

Query: 301 RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVHGLFLLIGLGLMYWEPLRLK 360
           RF K+ PAIL+Y+ Y   L + + A+E G LP+ +G+W ++   LL  L +   + + ++
Sbjct: 295 RFAKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMVNTLDSIPVR 354

Query: 361 R 361
           R
Sbjct: 355 R 355