Pairwise Alignments

Query, 371 a.a., Permease YjgP/YjgQ family protein from Pseudomonas putida KT2440

Subject, 370 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  250 bits (639), Expect = 4e-71
 Identities = 144/372 (38%), Positives = 223/372 (59%), Gaps = 6/372 (1%)

Query: 1   MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFL 60
           MIVFRYL REVL    AV  VLL I +S  F++ LA A+ G     ++  ++G  LP  +
Sbjct: 1   MIVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLV 60

Query: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120
            L+LPL LFLGIL+A+GR+Y E+EM +L   G+S+  +  +T+  A +  L   +LSL +
Sbjct: 61  VLVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYV 120

Query: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 180
           AP    Q  Q++ +  +      LV GRFQ   +G  V + E++  D   L  VF+++  
Sbjct: 121 APWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDN-ELEKVFVAQLP 179

Query: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240
              D+      +V+VA+ G      +G++ L L +G RY G+P Q DY+ I++  Y + +
Sbjct: 180 DPNDEIG--LTNVVVAKGGRVIEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQI 237

Query: 241 PKPEVAEEVTEREALPTSELIGKEGLRERAELQWRLSLPILVFVVTLLAVPLSRVNPRQG 300
            + +V E   +  ALP  EL+  +G    AE  WRL++P+ + ++TL+AVPL+RVN RQG
Sbjct: 238 KEQQVDERRRKLSALPLGELLKIDGPEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQG 297

Query: 301 RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVHGLFLLIGLGLMYWE-PL-- 357
           +F K+LPA+LLY+ Y  ++++ R AL+ G +P+ LGMWW+H   L++G+ L+  + PL  
Sbjct: 298 KFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPLYLGMWWIHLSALIMGILLLGKDRPLFT 357

Query: 358 RLKRAARRAEVA 369
           RL  A  R +VA
Sbjct: 358 RLSAAMARKKVA 369