Pairwise Alignments

Query, 948 a.a., valine--tRNA ligase from Pseudomonas putida KT2440

Subject, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 1300 bits (3363), Expect = 0.0
 Identities = 623/959 (64%), Positives = 767/959 (79%), Gaps = 13/959 (1%)

Query: 1   MDKTYQPHAIETSWYNTWESENYFAPQG--AGESYTIMIPPPNVTGSLHMGHGFNNAIMD 58
           M+KTY P +IE + Y  WE + YF P G  +  +Y IMIPPPNVTGSLHMGH F + IMD
Sbjct: 1   MEKTYNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 59  ALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLEAK-GQNRHDLGREKFLEKVWEWKDQ 117
            LIR++RM+G++TLWQ GTDHAGIATQMLVER++EA+ G++RHDLGRE F++++W+WK+Q
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQ 120

Query: 118 SGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLH 177
           SGG I++Q+RRLG+SVDW RERFTMD+G+S AV+E FVRL+ D LIYRGKRLVNWD KLH
Sbjct: 121 SGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLH 180

Query: 178 TAISDLEVENHDEKGHLWNLRYPLADGAKTAEGQDYLVVATTRPETLLGDAAVAVNPNDE 237
           TAISDLEVEN +++G +W+ RYPLADGA TA+G+DYL VATTRPET+LGD+AVAV+P+DE
Sbjct: 181 TAISDLEVENKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE 240

Query: 238 RYQALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNI 297
           RYQ+LIGKF+ LP+V RRIPI+ADDY D EFGTGCVKITPAHDFNDYEVGKRHNLP+ NI
Sbjct: 241 RYQSLIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNI 300

Query: 298 FDKNAFVLSSAQAFNLDGSVNEQVDTQLPAQYANLDRFVARKQIVADLDAQGLLVSIDDH 357
              +A + S A+  N DG+ N+++D  LP ++A LDRF AR  IV + ++ GLL  ID H
Sbjct: 301 LTIDAAIRSQAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPH 360

Query: 358 ALKVPKGDRSGTVIEPWLTDQWYVSTKPLAEPAIAAVEDGRIQFVPKQYENMYFSWMRDI 417
           ALKVP GDRSG VIEP LTDQWYV+  P+A+ AI AVE+G I+FVP+QYENMYFSWMRDI
Sbjct: 361 ALKVPYGDRSGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI 420

Query: 418 QDWCISRQLWWGHRIPAWYDEAGQVYVGRNEEEVRAKHKLGADVVLRQDDDVLDTWFSSG 477
           QDWCISRQLWWGHRIPAWYDEAG+VYVGR+E EVRAKH L   VVLRQD DVLDTWFSS 
Sbjct: 421 QDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHNLDDSVVLRQDPDVLDTWFSSA 480

Query: 478 LWTFSTLGWPEQTEFLKKFHSTDVLVTGFDIIFFWVARMIMLTMHLIKNEDGTPQVPFKT 537
           LWTFSTLGWP+ TE LK FH TDVLVTGFDIIFFWVARMIM+TMH IK+EDG PQVPFKT
Sbjct: 481 LWTFSTLGWPDDTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT 540

Query: 538 VYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGITLDALLEKRTSGMMQPKLAEKIAKQTKA 597
           VYV GL+RD QG KMSKSKGNVLDPLD++DGI L+AL+EKRT  MMQP+LA KI K T+ 
Sbjct: 541 VYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK 600

Query: 598 EFPEGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVL--DKGED 655
           EF +GI ++GTDALRFT  ++ASTGRDI +DM R++GYR+FCNKIWNA+RYVL   + +D
Sbjct: 601 EFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEEQD 660

Query: 656 CG---QNGEA---YELSLADRWIISQLQRTEAEVTRQLEQFRFDLASQALYEFIWNQYCD 709
           CG    NG+A    +LSLADRWI+    +T       +E +RFDLA+  LYEF WNQ+CD
Sbjct: 661 CGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQFCD 720

Query: 710 WYLELSKPVLWDENAPVERARGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGID 769
           WYLEL+KPVL  +N      RGTR TLV VLE   RL HP MP++TE IWQR+ PLAG++
Sbjct: 721 WYLELTKPVL--QNGTEAEQRGTRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKPLAGVE 778

Query: 770 GKTIMLQPWPVANEARIDAAAEGDIEWLKELMVGLRNIRAEMNIGPGKPLPLFLKNANAD 829
           G T+ML  +PV   +++D AA  D+EW+K+++V +RNIRAE+NI P KPL   L++ +A 
Sbjct: 779 GDTLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLRSVSAQ 838

Query: 830 DQRRLQENEALLKKLAKVESFTVLGDADEAPLSATALVGDLQVLVPMAGLIDKDAELARL 889
           D+ R++ N+     LAK+ES T+L D D AP+S T LVG++++L+PMAGLID  AE+AR+
Sbjct: 839 DKARVEANQTFFATLAKLESMTILADGDTAPMSTTQLVGEMELLIPMAGLIDVAAEMARI 898

Query: 890 NKEIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFTEQHARIAAL 948
           +K+ ++L GE +R+ GKL+N  FV KAP AVIEKERAKLAE ++ +    EQ A +A L
Sbjct: 899 DKQFEKLVGEAKRIEGKLNNQGFVAKAPEAVIEKERAKLAEFQRDMDKLCEQKAELAKL 957