Pairwise Alignments

Query, 335 a.a., Nucleoid-associated protein PP_0973 from Pseudomonas putida KT2440

Subject, 333 a.a., nucleoid-associated protein from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (478), Expect = 1e-52
 Identities = 107/331 (32%), Positives = 183/331 (55%), Gaps = 5/331 (1%)

Query: 3   IRHCIVHLIDKKPDGSPAVLHARDSELAASDAIENLLADLNDSYNAKQGKAWGFFHGESG 62
           + + I+H + +K D    V++ R   L    + ENL+A+L+  +NAK GK +G F  +S 
Sbjct: 5   LSNVILHQL-RKNDNDELVVNYRAESLRNDTSTENLVAELHRVFNAKAGKGFGCFKSDS- 62

Query: 63  AYPLSGWLKQYLDEEKDFTAFSRVAVEHLQKLMEESNLSTGGHILFAHYQQGMTEYLAIA 122
                 WL++       F  FS+ + + L+  + +   +  G ++ A YQ   T+YL I 
Sbjct: 63  --EFQLWLQEMRRGTLPFYEFSQQSAQRLKNELAKYPFADEGILVMAEYQSLATDYLFIG 120

Query: 123 LLHHSEGVAVNAQLDVTPSRHLDLGQLHLAARINLSEWKNNQNSRQYISFIKGKNGKKVS 182
           LL  ++ + V   LD++ + +LD+ ++ + ARI+LS ++ ++ S++Y+S+IKG+ G+KV+
Sbjct: 121 LLPLNQSLKVTEGLDISATDYLDINKMDIVARIDLSSYETDKESKRYLSYIKGRVGRKVA 180

Query: 183 DYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEESAREKTQTLVEYATTQTKLGEP 242
           D+F DF+    G+D   + + L++A  DF       +E      + + EY   Q K G+ 
Sbjct: 181 DFFLDFLQADIGLDTKQQNQVLMQAVEDFCADAKFEKEEVISYKKQVYEYCNDQIKAGDE 240

Query: 243 VTLEELS-SLIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEA 301
           V ++ELS  L   +    F+D  R + Y L    PAD+ T+ +  ++ G   GL++SF++
Sbjct: 241 VRVQELSGELPPSNEGVNFFDFTREQGYQLEESFPADRSTVRKLTKYVGAGGGLNLSFDS 300

Query: 302 HLLGDKVEYDEAAGTLIIKGLPTTLVDQLKR 332
            LLG++V YD    TL IKG P  L DQL R
Sbjct: 301 LLLGERVFYDPETDTLTIKGTPPNLRDQLTR 331