Pairwise Alignments

Query, 335 a.a., Nucleoid-associated protein PP_0973 from Pseudomonas putida KT2440

Subject, 338 a.a., nucleoid-associated protein NdpA from Marinobacter adhaerens HP15

 Score =  143 bits (360), Expect = 7e-39
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 3/333 (0%)

Query: 1   MPIRHCIVHLIDKKPDGSPAVLHARDSELAASDAIENLLADLNDSYNAKQGKAWGFFHGE 60
           M I+H       +   G PA L   ++        E L   +   +N+K GK +G F  +
Sbjct: 1   MAIKHLRTAFASQYQPGQPARLVTGEALQEPGGDYEGLHKQMKRLFNSKPGKKYGRFSED 60

Query: 61  SGAYPLSGWLKQYLDEEKDFTAFSRVAVEHLQKLMEESNLSTGGHILFAHYQQGMTEYLA 120
            G  P S WLK YL++++ F A +       Q+L+  S     GH++  H      E + 
Sbjct: 61  LGECPFSAWLKDYLEDKQTFGAMTDRLFGQWQELLTGSQEEFDGHLMIVHDALADAEVVY 120

Query: 121 IALLHHSEGVAVNAQLDVTPSRHLDLGQLHLAARINLSEWKNNQNSRQYISFIKGKNGKK 180
           + +L     +  +    +  +  L L +L+LA RI L +W+ N  +  Y++ + G+   +
Sbjct: 121 LFILETDSAMRFDGNQSLDATDVLSLSRLNLAVRIELDDWRGNNPAENYLTLVHGRGTGE 180

Query: 181 VSDYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEESAREKTQTLVEYATTQTKLG 240
             + F    G    VD   ET T L A   F +S +   E A E      E+   Q  LG
Sbjct: 181 PGELFIRLCGFTNQVDVEKETMTFLDAVEAFAKSSE--PEKAGEVRNKAYEFCKEQHALG 238

Query: 241 EPVTLEELSSLIDEDRPKAFYDHI-RNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISF 299
           EPV +E LS  +DE  P+ F +   +  +   S  +  D R + +  R  G   G+S+SF
Sbjct: 239 EPVEIEALSGYLDESEPQRFKEFASKTAELPESGVLHPDHRKVKKLVRIAGSGGGMSVSF 298

Query: 300 EAHLLGDKVEYDEAAGTLIIKGLPTTLVDQLKR 332
            + L+   + YD     L I  LP  L +QL+R
Sbjct: 299 SSDLVNQAIYYDRDKDALTITRLPKALREQLQR 331