Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  142 bits (357), Expect = 8e-39
 Identities = 83/250 (33%), Positives = 133/250 (53%), Gaps = 14/250 (5%)

Query: 1   MATLKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRV 60
           M  LK   +  S+ G + +  V  S+  G+I+ ++GPNGAGKTT F ++ G+  A+ GR+
Sbjct: 1   MTLLKVSDVGISFGGVKAIDGVGFSVAPGEILSIIGPNGAGKTTLFNVVSGMYAADHGRI 60

Query: 61  LIDNLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMA--ILETRKDLDRD------ 112
            +D  DV+  P    A  G+    Q   IF +++ A+N+M    L+ R  L  D      
Sbjct: 61  DLDGRDVTGLPPDELATRGLSRTFQNLQIFHRMTAAENVMVGRHLQERCSLFADLLRLPS 120

Query: 113 ------GRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFA 166
                   R    +LL +  +  I D    SLS G  +R+EIARALA  P+ +LLDEP A
Sbjct: 121 VTRQNRATRAAALTLLDQVGLRDIADVAAGSLSYGASKRLEIARALAAEPRVLLLDEPAA 180

Query: 167 GVDPISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILA 226
           G + +   +I ++I  +  +GI V++ +H+++  + I     ++N GR++ EG  + +  
Sbjct: 181 GCNSVETEEIDRLICRVADQGIAVVLVEHDMKLVMKISHRILVLNQGRMLVEGTPDEVRH 240

Query: 227 NELVKEVYLG 236
           N LV E YLG
Sbjct: 241 NPLVAEAYLG 250