Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 260 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Dechlorosoma suillum PS

 Score =  145 bits (365), Expect = 1e-39
 Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 16/250 (6%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  +++ K + G  V++DVS  + +G I GL+GPNGAGKTT F +I GL+    G++   
Sbjct: 10  LSIRNVGKHFGGLHVLQDVSFEVPAGSIYGLIGPNGAGKTTVFNLITGLLTPSAGQIDFQ 69

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETR---------------KD 108
              +     H     GI    Q   IF+++ + +N+M  +                  + 
Sbjct: 70  GQTLIGLEPHRITHQGIARTFQNIRIFKEMDLLENVMVGMHDHLNYGGFGIFLNSPACRA 129

Query: 109 LDRDGRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGV 168
            ++  R + LE LL    + H  D L  +LS G++R++E ARALAT PK +LLDEP AG+
Sbjct: 130 AEKKARERALE-LLSWVGLDHKADMLADNLSYGDQRKLEFARALATEPKLLLLDEPVAGM 188

Query: 169 DPISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANE 228
           +P     + + I++++ +G GV + +H++R  + +C+   ++N GR+IAEG  + +  N 
Sbjct: 189 NPSEKTILMEEINNIRNRGYGVFMIEHDMRFVMGLCDRIAVLNFGRIIAEGTPDEVRNNP 248

Query: 229 LVKEVYLGHE 238
            V E YLG E
Sbjct: 249 DVIEAYLGKE 258