Pairwise Alignments

Query, 485 a.a., endoribonuclease G (RNAse G) from Pseudomonas putida KT2440

Subject, 488 a.a., ribonuclease G (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  564 bits (1453), Expect = e-165
 Identities = 285/494 (57%), Positives = 369/494 (74%), Gaps = 15/494 (3%)

Query: 1   MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDI 60
           M  E+LIN+TP E+RVA+VE+GVLQEVH+ER  +RG+VGNIYKGK+ RVLPGMQAAFVDI
Sbjct: 1   MGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDI 60

Query: 61  GLERAAFIHASEIS---------QREGSAVENITALVHEGQALVVQVTKDPIGTKGARLT 111
           GL++AAF+HAS+I          ++    V +I  LV +GQ ++VQV KDP+GTKGARLT
Sbjct: 61  GLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLT 120

Query: 112 TQLSIPSRYLVYMPRSSHVGISLKIEDEAERERLKQVVSDCMDGENIKDAGGFILRTAAE 171
           T +++PSRYLV+MP SSH+G+S +IE E ER RLK++    +D +     GGFI+RTAAE
Sbjct: 121 TDITLPSRYLVFMPGSSHIGVSQRIEQEEERSRLKKITLPFVDED-----GGFIIRTAAE 175

Query: 172 GARAEEILQDIRYLRRLWEQIGTQIKTCGAPTVIYEDLGLALRTLRDLVNPKIEKIRIDS 231
           G   +E+ QD  +LRR+W ++  + +  G   ++Y+DL L +R +RD V  ++++I++DS
Sbjct: 176 GVGEDELAQDAAFLRRVWSKVSERRQRRGV-ALLYQDLALPVRIVRDFVGTELDRIQVDS 234

Query: 232 RETFQKTTQFVGELMPEIADRLEHYPGERPIFDLYGVEDEIQRALERKVPLKSGGYLVVD 291
           R TF +   F  E MPEIAD++EHY G  PIFDLY VE+EIQRAL RKV LKSGGYL++D
Sbjct: 235 RRTFAELQAFAQEFMPEIADKIEHYSGPAPIFDLYDVENEIQRALGRKVELKSGGYLIID 294

Query: 292 PAEAMTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNIGGIIIIDFIDMEDED 351
             EAMTT+D+NTGAFVGHRNLEETIF TNLEA  AIARQLRLRN+GGIIIIDFIDM  ++
Sbjct: 295 QTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLSDE 354

Query: 352 HQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCLACQGRGKLK 411
           H+ +VL +L   L +D  KTN+   + LGLV+MTRKRTRESLE VLC  C AC+G G +K
Sbjct: 355 HKTRVLNSLNSALAKDRVKTNVSAFSGLGLVEMTRKRTRESLEHVLCGECPACKGTGSMK 414

Query: 412 TPETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEAFIGRTIRFQV 471
           T ET+ YEIFREI+R  RAY A+ + +  +  V + L  +ES  VAELE +IG+ IR Q 
Sbjct: 415 TVETVSYEIFREIIRLNRAYDADEFLLYCSPAVYNSLSGDESHLVAELEVYIGKRIRLQN 474

Query: 472 ESMYSQEQYDVVLL 485
           E MYSQ +YDVV++
Sbjct: 475 EPMYSQHKYDVVMM 488