Pairwise Alignments

Query, 315 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (569), Expect = 4e-63
 Identities = 131/321 (40%), Positives = 193/321 (60%), Gaps = 14/321 (4%)

Query: 3   MLALLIQTLNITAPVFAMLFMGVLLKRIHLIDDNFNRVASQLVFNVCMPALLFLGIYHAD 62
           ++A L  +  IT P+  ML +GVL KRI+LI++NF  VAS++VF V +PA+LFL I  + 
Sbjct: 16  IIAQLQFSATITGPICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSK 75

Query: 63  LAAAVKPGVILYFIVATLVGFAIAWGMAIWRSPMADR----GIYTQGAFRGNNGVIGLAL 118
              +    +++Y ++A ++ F            + DR    G+ TQG FR N  +IGLA 
Sbjct: 76  HDFSSSTSLVVYSLIANMLFFLFT---LFSTRKLIDRPHDWGVITQGGFRANTAIIGLAY 132

Query: 119 AASLYGDYGISLGAVLAGLVILMYNSLSAVVLAVYSPDLKSDPWSICKSIFS----NPLI 174
            A+ YG+ G++L A+      +++N  + + L   +P  +S+ W   K +F     NPLI
Sbjct: 133 VANTYGNAGVALAAIYVASTTVLFNIQAVIAL---TPRGESNGWQAGKLMFKTLTKNPLI 189

Query: 175 ISVLVAAPMAYGQVPLPNWLLTSGDYLAQMTLPLALICIGGTLSLAALRNCGRLAIDASF 234
           IS+++        VP+P  +  +G Y A MTLPLAL+C GG+L+L +L++    A  A+ 
Sbjct: 190 ISIVLGFLCYLASVPIPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDDRHSAWFATG 249

Query: 235 VKMLWLPLLGTLGAWLCGFRGAELGILFLYIGSPTAAASYVMARAANGNHELAASIIVIT 294
            K++  PLL T GAWL GFRG +LG+LFL   +PTAAASYVMARA  GN  LAA+II +T
Sbjct: 250 YKLILSPLLITGGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALT 309

Query: 295 TLMAAITTNIGIFILQWGGWI 315
           T+ +  T  +GIF+L   G I
Sbjct: 310 TVFSLFTCTLGIFLLSSFGVI 330