Pairwise Alignments

Query, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 793 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  330 bits (846), Expect = 2e-94
 Identities = 181/440 (41%), Positives = 261/440 (59%), Gaps = 2/440 (0%)

Query: 238 LLASIERNTHLRHEAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCV 297
           L+  I  +   R   E   QRM   D LT L NR  L+QQ+ ++++     +   A+L +
Sbjct: 336 LVQGIASDITQRKLVETFAQRMTVTDLLTSLGNRMGLEQQIREMIIL--HPEQPFALLLI 393

Query: 298 GLDDFKGINEQFSYQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAA 357
            LD FK IN+   + VG++LLL  A+RLR        L R  GD+FAL+  N+E     A
Sbjct: 394 NLDGFKRINDGQGFDVGNELLLMAANRLRNCIKGSDWLGRTSGDEFALLLPNVEGQEIPA 453

Query: 358 ELAQSILDDLEVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNR 417
           ++A  I++ L + ++L      + +++GI L+PEDG     LL+ AE  +   K      
Sbjct: 454 KVAHRIVETLGLAYELGDTPAFVGSSVGIALYPEDGRELLTLLRNAELALDRVKRSGGRD 513

Query: 418 YQFYIASVDSEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPEL 477
           YQF+  S+ +    RR LE +LR A  R +L L YQP +  + +R+ G EAL+RW HP+ 
Sbjct: 514 YQFFHPSMAAAAENRRRLENELRLAAERQELRLFYQPIVDIQQNRLAGAEALIRWVHPQQ 573

Query: 478 GMVPPDQFIPLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSEL 537
           GMVPPD FIP+AE+ G I  IG WVL+ AC QL++W  +G  DL +++N+S  Q+ H   
Sbjct: 574 GMVPPDDFIPVAEETGLIQEIGLWVLETACDQLQQWRREGREDLYLSINVSGSQIPHGLP 633

Query: 538 PRVVNNLLQAYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSL 597
           P  V   L    LPP +L LE+TE  LM D+  A + L +LR+ G  I +DDFGTGYSSL
Sbjct: 634 PSAVMEALSRRSLPPGALVLEITEGVLMSDMKQALEWLQALRQVGIRIYLDDFGTGYSSL 693

Query: 598 SYLKSLPLDKIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIV 657
           SYLK  P+  +K+DKSFV+D+  D  D  +V AI+ + +SLG++V+AEGVE   Q   + 
Sbjct: 694 SYLKRFPVTTVKVDKSFVRDMGQDSSDRALVEAIVAMTRSLGLEVVAEGVENEAQLALLR 753

Query: 658 AQGCHEGQGYHYSKPLSARE 677
           + G   GQGYH+S+P+ A +
Sbjct: 754 SMGTRYGQGYHFSRPVPASD 773



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 20/224 (8%)

Query: 32  LAVGVVLSCAQIIYDTYKTRQAVDSDAQRILDMFRDPSTQAVYSLDREMGMQVMEGLFQD 91
           L VG ++     +   +  +Q  ++    +LD   +    A +  D ++  +V  GL ++
Sbjct: 22  LLVGTLVIGITWVVTNHLAQQEANNRLGELLDTIEETVRIACFIEDAQLATEVARGLIRN 81

Query: 92  ESVRMASIGHPNETM-LAEKSRPLQDMSMRWLT-DLILGQERTYTTQLVGRGPYSEYYGD 149
             V   SI   N+ +   E+S  L   S   L  D+    + T     +   P  E    
Sbjct: 82  SEVAAVSIRSLNQELGREERSGQLSQNSAAALRRDIYSPFDPTRRVGEIELQPNRE---- 137

Query: 150 LSITLDTSSYGKDFLINAVIIFISGVLRAMAMGLVLYLVYHWLLTKPLSKIIEHLTQINP 209
               L+  ++ +   +  V+     +L    + +VL L+       P+  I + L  + P
Sbjct: 138 ---ALEQRTFRESLFVGLVLAAQLALLTLAVIFIVLRLI-----VAPIKAISDRLHLLKP 189

Query: 210 DRPSQHQIPLLKGHEKNELGLWVNTAN----QLLASIERNTHLR 249
               +  +P   GH  NE+G  V+  N     L+A++E    LR
Sbjct: 190 TLGER--LPAPPGHGGNEIGRLVDDINGLTEDLVAALEEEHSLR 231