Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (582), Expect = 2e-64
 Identities = 134/367 (36%), Positives = 207/367 (56%), Gaps = 17/367 (4%)

Query: 33  VVLLIVLALGGYKAFSIYQQIQ----MFTAPKPPITVAAAMAEQRPWQERLPAVGSLKAL 88
           ++L+ +L  G    F++++Q +    +   P+P   V    A    W   + A+G ++  
Sbjct: 8   MLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPN 67

Query: 89  QGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLAKVDFGRGS 148
           QGV L+ E  G++  + F+SG QV   Q L+ L+   E A L +  A L  AK  + R  
Sbjct: 68  QGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYK 127

Query: 149 QLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQVDIGQYLAA 208
            L    +IS+  +D   + Y    A +E LKA   ++ I APF+G IGIR V +GQYL  
Sbjct: 128 GLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQP 187

Query: 209 GTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAINPKVEETT 268
           GT I  L+DTS + + F VP++ +  +SL Q+V + V AYP   F GS+SAI P V   +
Sbjct: 188 GTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQS 247

Query: 269 RNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYVASPRKDK 328
             + V+A + N DGKL  GMFA   I+LP  + QV +P++AITYTLYG++VY+ S     
Sbjct: 248 GLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVS----- 302

Query: 329 DGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLTPGAAIRIG 388
                 ++ G+ ++  +Q  VK GER + +  + EG++ G+ VVT GQ++L+ GA +RI 
Sbjct: 303 ------EENGEKRV--QQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIV 354

Query: 389 QDNALKP 395
           + +A  P
Sbjct: 355 ESDATTP 361