Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 427 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

 Score =  133 bits (335), Expect = 9e-36
 Identities = 111/385 (28%), Positives = 171/385 (44%), Gaps = 66/385 (17%)

Query: 60  KPPIT-VAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLL 118
           + PIT V AA+ E++P QE     G+ +  Q V L  +VEG V  L  D G  V++GQLL
Sbjct: 41  RSPITAVDAAVVERQPLQEATRYTGTTEPFQSVSLRAQVEGQVLGLSVDVGDPVQSGQLL 100

Query: 119 LQLNDDQETALLGTALADLGL----------------------------AKVDFGRGSQL 150
            +L+D  ++  +  A A++                              A+ D  R ++L
Sbjct: 101 ARLDDRLQSTAVVAAAAEVAARQSEVASQRAEVIAAMASVEQARLQLQQARSDAARLTRL 160

Query: 151 VGDSAISRGEFDR-------------------------LSSQYRR---NQAVVEQLKAQK 182
               AIS  E +                          +++  RR    QA+  Q +A++
Sbjct: 161 FQAGAISAQEAETAQTAVLTAEQAVRTAQQQVQTRQQAVAAAERRVVAQQAIANQEQARR 220

Query: 183 IKKRINAPFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVL 242
              ++ AP +G +  R  + G     G  I T+ D S + V   V E  L +L +GQ V 
Sbjct: 221 NFTQLIAPVTGLVLERSTEAGNLAREGDEILTIGDFSRIKVVLRVSELELANLRVGQSVQ 280

Query: 243 VQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQ 302
           V++ A+P Q F G +S I P  +  TR + V  TM NPDG++  G+ A +++    P P 
Sbjct: 281 VRLDAFPKQTFTGQISRIAPVADRRTRLIPVEITMPNPDGRIGSGLLARVVLSSSAPDP- 339

Query: 303 VVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVS 362
           +VVPE+A++           +P     G      K   +   E R+V+ G R DG VV+ 
Sbjct: 340 IVVPEAALSTG--------ETPTTSDRGTVFVVKKQGDRTTTEARSVRLGPRADGRVVIQ 391

Query: 363 EGLQAGEQVVTAGQLKLTPGAAIRI 387
            GLQAGE +V      L  G  +R+
Sbjct: 392 SGLQAGETIVVRSASPLKAGQQVRL 416