Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 398 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 1e-29
 Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 18/336 (5%)

Query: 65  VAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDD 124
           V    AE+    +RL A+G+ +A++ V ++    G +  +   SG ++  GQ++ +L+ D
Sbjct: 77  VVVKPAERAVVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEGQVIARLDSD 136

Query: 125 QETALLGTALADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIK 184
            +      A      A+    R   L    A++  E        +  +  ++  +    +
Sbjct: 137 DQMIAAEQARLTRDSAREKVERYRNLSTARAVTAVEVRDSEIALQAAELALKTAELDLKR 196

Query: 185 KRINAPFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQ 244
           + I AP  G +GI  V+IG Y+   T IA + D S + VDF VPE+    +S+ Q V   
Sbjct: 197 RDIVAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILVDFWVPERFAGKISVDQPVTAS 256

Query: 245 VAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVV 304
             A PG+   G + AI+ +++  +R L VRA + NPD  L  GM  S+ +     +   V
Sbjct: 257 AIAQPGRALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFDGDRYPTV 316

Query: 305 VPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEG 364
            P  AI ++  G+ ++            V  DK      +E+  +K  +R    V+V   
Sbjct: 317 DP-LAIQWSSEGSFIW-----------RVKGDK------SERVPIKIIQRNPDKVLVDAE 358

Query: 365 LQAGEQVVTAGQLKLTPGAAIRIGQDNALKPEPGAA 400
           L  G++VVT G  +L  G  +RI  + A + E   A
Sbjct: 359 LAEGDRVVTEGVQRLRDGGVVRIAGEPAAEAEQKVA 394