Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 402 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  128 bits (321), Expect = 3e-34
 Identities = 113/394 (28%), Positives = 179/394 (45%), Gaps = 63/394 (15%)

Query: 35  LLIVLALGGYKA--FSIYQQIQMFTAPKPP-------ITVAAAMAEQRPWQERLPAVGSL 85
           L I+L++GG  A  F + Q+ Q   A + P       + V+ A AE R         G L
Sbjct: 15  LSILLSVGGGAAVFFGLPQRFQADAATEAPAAAVPPAVPVSVAKAESRRITTWESFSGRL 74

Query: 86  KALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDD-------QETALLGTALADLG 138
           +A++ V++   V G + S HF  G  V+ G LL+ ++ +       +  A +  A A + 
Sbjct: 75  EAIERVEIRPRVGGAILSAHFREGALVEKGDLLVTIDPEPFAAAVERAEAQVAAAEARVA 134

Query: 139 LAKVDFGRGSQLVGDSAISRGEFDRLSSQY-------RRNQAVVEQLKAQKIKKRINAPF 191
           LA+ +  RG +LV  SAI +   D+  S Y       R  +A +   K       + AP 
Sbjct: 135 LARTELERGRKLVTTSAIPQSGVDQRLSVYDEARANLRSAKAALHTAKLDLEYTEVRAPI 194

Query: 192 SGTIGIRQVDIGQYLAAGT---VIATLQDTSSLYVDFNVPEQ----ALPHLSLG------ 238
           SG +G   V  G  + AGT   V+ TL     +Y  FNV E+    AL  LS        
Sbjct: 195 SGRVGRLNVTAGNLVTAGTASPVLTTLVSVDPIYASFNVSEEVVAAALAKLSASAGSIDA 254

Query: 239 -QQVLVQV--AAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLIL 295
            +++ V++  +A  G    G +  IN +V+  T  + VRA + N DG+L+PG F  + I 
Sbjct: 255 IERIPVEIGTSADEGTPITGHIQLINNEVDAATGTIRVRAELTNADGRLIPGQFVRIRIG 314

Query: 296 LPNPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVY----DDKGQPQLVAEQRTVKT 351
            P P+ ++V+ + A++               D+D K V     D+K       E R V  
Sbjct: 315 DPQPEEKLVISDRAVS--------------SDQDKKFVLVVGADNK------VEYRQVTL 354

Query: 352 GERRDGVVVVSEGLQAGEQVVTAGQLKLTPGAAI 385
           G   DG+ +V  GL+ GE ++  G  ++ PG  +
Sbjct: 355 GPVADGLRIVENGLKPGESIIVNGLQRVRPGVVV 388