Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 381 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  258 bits (660), Expect = 2e-73
 Identities = 146/382 (38%), Positives = 226/382 (59%), Gaps = 15/382 (3%)

Query: 22  MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFT-APKPPITVAAAMAEQRPWQERLP 80
           M ++R+ IML   +++   + G+  F  +   Q F   P+P ITV    A    WQ+ +P
Sbjct: 1   MKKKRLAIMLVGSVVLFGGVIGFTVFRDHMIAQYFANQPEPVITVTVEDARAEDWQDTIP 60

Query: 81  AVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLA 140
           AVG+L+A+ GV +   V GIV+++ F+SGQ+VK G LL++L+D +E   L    A   L+
Sbjct: 61  AVGTLRAINGVTVGAAVAGIVETISFESGQRVKKGDLLVRLDDGEERGELDAVRAQAELS 120

Query: 141 KVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQV 200
           ++  GR  +LV  +A +R   D   +Q R N A + QL+A+  KK + APF G +G+R V
Sbjct: 121 RITAGRARRLVQSAAGTRANLDDAEAQLRVNLATIGQLEARVAKKTVTAPFDGVLGVRAV 180

Query: 201 DIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAI 260
           D+G+Y+ AG  +  LQD S +  DF+V ++ L  +++G ++ +   A+PG+ F G++ AI
Sbjct: 181 DLGEYVTAGQTLVDLQDLSVILADFSVSQKDLGRVAVGAKLTLTTDAWPGRAFEGTIKAI 240

Query: 261 NPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVY 320
            PKV+  T   +V     NPDG L PGMFA L +L    Q  V VP +A+TY+L+G+++Y
Sbjct: 241 APKVDANTGMAVVEGRFDNPDGALRPGMFAKLAVLRAERQSVVTVPATAVTYSLHGDALY 300

Query: 321 VASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLT 380
           V      +DGK          +  ++ TV TG RR   VVV+ GL AG++VVT+GQ+KL 
Sbjct: 301 VLK-EAGEDGK----------VRVDRITVTTGVRRGDRVVVTAGLSAGQRVVTSGQVKLN 349

Query: 381 PGAAIRIGQ---DNALKPEPGA 399
            G+A+ + Q   + A + E GA
Sbjct: 350 DGSAVAVAQAPLNTAARAESGA 371