Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 418 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  120 bits (301), Expect = 7e-32
 Identities = 108/384 (28%), Positives = 168/384 (43%), Gaps = 34/384 (8%)

Query: 22  MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAAMAEQRPWQERLPA 81
           M R +   ++ ++  ++LA GGY A+      Q  TAP           E+    + + A
Sbjct: 1   MKRPQKKTVVLILAALLLAGGGYVAY------QKLTAPGLEQRYKLQTLEKGELTQSVSA 54

Query: 82  VGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDD-------QETALLGTAL 134
            G+L  +  V++  +V G VK L+ D   QVK GQ+L +L+D        Q  A + +A 
Sbjct: 55  NGTLNPVTLVNVGTQVSGTVKKLYVDFNDQVKQGQILAELDDSLYSAQVHQSDANIASAR 114

Query: 135 ADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRIN------ 188
           A L LA     R   L     +SR E D+     R  QA + Q KA   K R N      
Sbjct: 115 ASLDLAIASEERMKSLFAQEYVSRQELDQAVQARRSAQAQLNQYKAANDKDRANLGYSVI 174

Query: 189 -APFSGTIGIRQVDIGQYLAAG----TVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLV 243
            +P SG +  RQ+D+GQ +AA     T+    QD +++ +  +  E  + ++ +GQ V  
Sbjct: 175 RSPVSGVVVDRQIDVGQTVAASFQTPTLFKIAQDLTAMQIYTSFAEADIGNIKVGQPVKF 234

Query: 244 QVAAYPGQRFPGSLSAI--NPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQP 301
            V A+P ++F G +  +  NP  ++      V   + NP+  LLPGM A + I +     
Sbjct: 235 NVDAFPNRQFKGEVKQVRLNPTTQQNVVTYNVVVVVDNPEQILLPGMTAYVNIAVAKRSD 294

Query: 302 QVVVPESAITYTLYGNSVYV--ASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGER---RD 356
            ++VP +A+ Y   G       A+     +G P     G P           GER   RD
Sbjct: 295 VLLVPNAALRYKPNGGQKPAPNAASNAAANGAPA---GGPPGAAGPGNGKGAGERQRKRD 351

Query: 357 GVVVVSEGLQAGEQVVTAGQLKLT 380
                   L+ GE V  +  L +T
Sbjct: 352 SASGTVHVLRGGEVVPVSVSLGIT 375