Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  179 bits (455), Expect = 1e-49
 Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 20/348 (5%)

Query: 58  APKPPITVAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQL 117
           AP  P+ V  A+A  +   +   AVG+L++ + V L  E  G + S+ F  G  V  G +
Sbjct: 50  APAAPLPVETALAAPQSITDEAAAVGTLRSNESVVLRPETAGRIASIGFKDGVPVAKGTV 109

Query: 118 LLQLNDDQETALLGTALADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQ 177
           L+ L+   + A L  A A+  LA  +F R  +L+    IS+   D  ++  +  +A V  
Sbjct: 110 LVALDAATQEAELQQAKANHALAVTNFKRTEELLAKKFISQQSLDTTAANLKVQEAAVAL 169

Query: 178 LKAQKIKKRINAPFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSL 237
            +A+  K RI APF+G +GIR+V +G Y+  G  +  L+D  +L +DF +PE  L  L  
Sbjct: 170 AEAKLAKTRIRAPFAGVVGIREVSVGDYVKEGADLINLEDIRTLKLDFRLPELYLSRLQK 229

Query: 238 GQQVLVQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLP 297
           GQ V V V A P Q F   L A++P V+   R + +RA + NP+ KL PGMFA + +L  
Sbjct: 230 GQAVEVSVDALPNQAFKAVLDAVDPLVDANGRAISLRARLDNPELKLRPGMFARVRLLFG 289

Query: 298 NPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDG 357
           N    +++PE AI       +V+     + ++GK            A++  VKTG RR+ 
Sbjct: 290 NRDGVLMIPEQAIVSGGGKQTVF-----RIEEGK------------AKKVEVKTGLRRNA 332

Query: 358 VVVVSEGLQAGEQVVTAGQLKLTPGAAIRIGQDNALKPEPGAAAKDSG 405
            V +  GL AG++++TAGQLK+  G+ ++   D A  P+P   A+ +G
Sbjct: 333 QVEILSGLAAGDRIITAGQLKVQDGSPVK-AVDAA--PQPAQDAEGTG 377